8BAU
Phytophthora nicotianae var. parasitica NADAR in complex with ADP-ribose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-05-26 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97629 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.829, 66.593, 72.888 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.212 - 1.600 |
Rwork | 0.198 |
R-free | 0.22790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.014 |
RMSD bond angle | 1.907 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.212 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.072 | 2.128 |
Rmeas | 0.077 | 2.246 |
Rpim | 0.024 | 0.712 |
Number of reflections | 29538 | 1421 |
<I/σ(I)> | 13 | 0.9 |
Completeness [%] | 100.0 | |
Redundancy | 9.6 | 9.8 |
CC(1/2) | 1.000 | 0.596 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 294 | 0.1 M Sodium HEPES pH 7.5, 20% (w/v) PEG10000 |