Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8B9X

Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-20
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameP 64
Unit cell lengths145.568, 145.568, 83.175
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution63.112 - 3.066
Rwork0.233
R-free0.27230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold model
RMSD bond length0.015
RMSD bond angle1.744
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]63.1123.280
High resolution limit [Å]3.0663.066
Number of reflections189673414
<I/σ(I)>8.7
Completeness [%]99.8
Redundancy5.9
CC(1/2)0.9970.446
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291Sodium acetate trihydrate Ammonium tartrate dibasic

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon