8B82
Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.410, 55.253, 114.284 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.740 - 2.800 |
R-factor | 0.2438 |
Rwork | 0.242 |
R-free | 0.27780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mtv |
RMSD bond length | 0.002 |
RMSD bond angle | 0.471 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.740 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.138 | 0.524 |
Number of reflections | 5671 | 560 |
<I/σ(I)> | 12.18 | |
Completeness [%] | 99.2 | |
Redundancy | 12.7 | |
CC(1/2) | 0.997 | 0.964 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293.15 | 15% PEG 4000, 0.05 M Ammonium Sulfate |