8B6A
Crystal structure of BfrB protein from Bacteroides fragilis NCTC 9343
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.999 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 92.465, 42.311, 110.392 |
Unit cell angles | 90.00, 95.49, 90.00 |
Refinement procedure
Resolution | 38.470 - 1.770 |
R-factor | 0.2082 |
Rwork | 0.205 |
R-free | 0.25913 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ewm |
RMSD bond length | 0.007 |
RMSD bond angle | 1.461 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.440 | 1.810 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.176 | 1.458 |
Rpim | 0.141 | 1.078 |
Number of reflections | 40527 | 1756 |
<I/σ(I)> | 4.2 | 0.5 |
Completeness [%] | 96.9 | 75.4 |
Redundancy | 3.9 | 2.5 |
CC(1/2) | 0.983 | 0.346 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 1.6M ammonium sulphate, 100mM sodium acetate, pH 5.5 |