8B4N
X-ray structure of phycoerythrin from Porphyridium cruentum
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | H 3 |
Unit cell lengths | 186.590, 186.590, 59.190 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.648 - 1.600 |
Rwork | 0.222 |
R-free | 0.25640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v58 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.602 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.648 | 1.625 |
High resolution limit [Å] | 1.597 | 1.597 |
Rmerge | 0.101 | 1.028 |
Rmeas | 0.107 | 0.999 |
Rpim | 0.035 | 0.360 |
Number of reflections | 100909 | 44973 |
<I/σ(I)> | 12.9 | 2.2 |
Completeness [%] | 99.0 | 98.3 |
Redundancy | 9.2 | 9 |
CC(1/2) | 0.997 | 0.595 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PE crystals were grown by hanging drop vapor diffusion method (Russo Krauss et al., 2013) using a drop containing 10 mg/mL PE in 0.250 M ammonium sulphate, 25.0 mM potassium phosphate at pH 5.0, equilibrated with a reservoir containing 0.500 M ammonium sulphate, 50.0 mM potassium phosphate at pH 5.0. |