8B2S
GH24 family muramidase from Trichophaea saccata with an SH3-like cell wall binding domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-01-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 99.438, 99.438, 133.254 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.582 - 1.940 |
Rwork | 0.168 |
R-free | 0.20130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hde |
RMSD bond length | 0.012 |
RMSD bond angle | 1.540 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.582 | 46.580 | 1.990 |
High resolution limit [Å] | 1.940 | 9.100 | 1.940 |
Rmerge | 0.073 | 0.029 | 2.263 |
Rmeas | 0.083 | 0.034 | 2.582 |
Rpim | 0.040 | 0.016 | 1.232 |
Number of reflections | 56987 | 631 | 3797 |
<I/σ(I)> | 16.2 | 50.2 | 0.9 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 8.2 | 6.6 | 8.5 |
CC(1/2) | 0.999 | 0.999 | 0.328 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | AmSO4 screen (Qiagen), condition C3: 0.2 M potassium fluoride, 2.2 M ammonium sulphate |