8B2E
Muramidase from Kionochaeta sp natural catalytic core
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.976 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 61.521, 61.521, 85.188 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 53.279 - 1.100 |
Rwork | 0.113 |
R-free | 0.12390 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.664 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | CRANK2 |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.280 | 53.280 | 1.120 |
High resolution limit [Å] | 1.100 | 6.020 | 1.100 |
Rmerge | 0.044 | 0.039 | 0.676 |
Rmeas | 0.049 | 0.043 | 0.775 |
Rpim | 0.021 | 0.019 | 0.369 |
Number of reflections | 71381 | 551 | 2466 |
<I/σ(I)> | 22.7 | 54.4 | 2.1 |
Completeness [%] | 94.1 | 99.9 | 66.4 |
Redundancy | 9.4 | 8.1 | 6.4 |
CC(1/2) | 0.999 | 0.998 | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.9 M sodium acetate, Hepes pH 7.5, 40 mM CdCl2 |