8B23
Time-resolved structure of K+-dependent Na+-PPase from Thermotoga maritima 600-seconds post reaction initiation with Na+
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-05-18 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 0.976 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 83.327, 111.552, 106.217 |
| Unit cell angles | 90.00, 109.05, 90.00 |
Refinement procedure
| Resolution | 100.400 - 3.840 |
| R-factor | 0.3357 |
| Rwork | 0.334 |
| R-free | 0.36340 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5lzq D_1292125586 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.725 |
| Data reduction software | XDS |
| Data scaling software | STARANISO |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 100.400 | 4.170 |
| High resolution limit [Å] | 3.840 | 3.840 |
| Rmerge | 0.165 | 0.779 |
| Number of reflections | 13078 | 654 |
| <I/σ(I)> | 4.4 | |
| Completeness [%] | 90.7 | |
| Redundancy | 6.5 | |
| CC(1/2) | 0.965 | 0.646 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 60 mM Tris-HCl pH 8.0, 26% v/v PEG400, 175 mM KCl, 2.4 mM MgCl2, 2 mM K4PPi, 20 mM NaCl |






