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8ARB

Heterologous Complex of shortened Aeromonas hydrophila Type III secretion substrate AscX with Yersinia enterocolitica chaperone YscY

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-07
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9919
Spacegroup nameC 2 2 21
Unit cell lengths90.330, 160.560, 156.740
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution80.280 - 2.630
R-factor0.293
Rwork0.291
R-free0.32620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7qih
RMSD bond length0.002
RMSD bond angle0.358
Data reduction softwareXDS (20200131)
Data scaling softwareXSCALE (20220220)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.2802.700
High resolution limit [Å]2.6302.630
Rmeas0.2294.831
Number of reflections342532292
<I/σ(I)>9.30.61
Completeness [%]99.392.6
Redundancy24.8612.93
CC(1/2)0.9960.239
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP295reservoir solution: 0.1 M Hepes pH 7.5, 0.6-0.9 M sodium dihydrogen phosphate, 0.6-0.9 M potassium dihydrogen phosphate [1.4-1.8 M total phosphate]; protein: 10 mg/mL in 20 mM Tris pH 8, 150 mM NaCl, 5 mM TCEP; drop size: 0.66 uL protein + 0.33 uL reservoir

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PDB entries from 2024-10-16

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