8AOL
Crystal structure of S-layer protein SlpX from Lactobacillus acidophilus, domain III (aa 363-499)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 133.174, 133.174, 70.572 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.432 - 2.400 |
Rwork | 0.178 |
R-free | 0.20500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8alu |
RMSD bond length | 0.015 |
RMSD bond angle | 1.777 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.432 | 48.430 | 2.490 |
High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
Rmerge | 0.198 | 0.092 | 1.516 |
Rmeas | 0.209 | 0.097 | 1.596 |
Rpim | 0.065 | 0.031 | 0.496 |
Number of reflections | 14935 | 349 | 1518 |
<I/σ(I)> | 10.1 | ||
Completeness [%] | 100.0 | ||
Redundancy | 19.1 | 15.8 | 19.4 |
CC(1/2) | 0.997 | 0.997 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | Protein stock solution of 10 mg/mL in 20 mM Hepes pH 8 and 100 mM NaCl; Wizard 1/2 screen condition 66 (20 % w/v PEG 3000, 200 mM Ca(OAc)2, 100 mM Tris base/HCl pH 7.0) with protein end concentration of 5 mg/mL corresponding to 50% of protein solution in the 1.0 uL drop |