8AMH
The Crystal structure of wt apo agroavidin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID09 |
Synchrotron site | ESRF |
Beamline | ID09 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.072 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 82.853, 83.639, 67.781 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.440 - 1.730 |
R-factor | 0.19374 |
Rwork | 0.192 |
R-free | 0.21836 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | rhizavidin |
RMSD bond length | 0.011 |
RMSD bond angle | 1.687 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.440 | 1.790 |
High resolution limit [Å] | 1.730 | 1.730 |
Rmerge | 0.061 | 1.090 |
Number of reflections | 47014 | 4789 |
<I/σ(I)> | 13.8 | |
Completeness [%] | 99.5 | 99.1 |
Redundancy | 5.1 | |
CC(1/2) | 0.990 | 0.639 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 25% PEG 3350, 0.1 M MgCl2, 0.1 M Bis-Tris pH 6 |