Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8AF8

Room temperature SSX crystal structure of CTX-M-14 (5K dataset)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]295
Detector technologyPIXEL
Collection date2019-12-16
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0332
Spacegroup nameP 32 2 1
Unit cell lengths42.160, 42.160, 234.350
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution14.980 - 1.550
R-factor0.1763
Rwork0.176
R-free0.19880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6gth
RMSD bond length0.011
RMSD bond angle1.176
Data reduction softwareCrystFEL
Data scaling softwareCrystFEL
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]17.7701.580
High resolution limit [Å]1.5501.550
Number of reflections364953514
<I/σ(I)>3.750.63
Completeness [%]100.0
Redundancy149
CC(1/2)0.9070.262
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE4.5293CTX-M-14 was produced, purified and crystallized as before, with a slight modification in crystallization conditions to obtain slightly bigger crystals which roughly match the X-ray focal spot. For this purpose, a 50% CTX-M-14 solution (22 mg/ml) was mixed with a 45% precipitant solution (40% PEG8000, 200 mM lithium sulfate, 100 mM sodium acetate, pH 4.5) and with a 5% undiluted seed stock in batch crystallization setups, resulting in crystals with a homogeneous size distribution of 11-15 um after 90 minutes. The crystals were centrifuged at 200xg for 5 min and the supernatant was replaced with a stabilization buffer (28% PEG8000, 140 mM lithium sulfate, 70 mM sodium acetate, pH 4.5) to stop further crystal growth.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon