8AEJ
X-ray structure of Canis familiaris Odorant Binding Protein 3 bound to menthone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978564 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 67.075, 67.075, 71.985 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.210 - 1.840 |
R-factor | 0.2222 |
Rwork | 0.220 |
R-free | 0.26080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6nre |
RMSD bond length | 0.012 |
RMSD bond angle | 1.219 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.210 | 1.880 |
High resolution limit [Å] | 1.840 | 1.840 |
Rmerge | 0.034 | 0.461 |
Rmeas | 0.035 | 0.473 |
Rpim | 0.010 | 0.105 |
Number of reflections | 16710 | 970 |
<I/σ(I)> | 42 | 5.2 |
Completeness [%] | 99.8 | |
Redundancy | 19.9 | |
CC(1/2) | 1.000 | 0.985 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 30% PEG 550, 6% 2-propanol in 0.1 M pH 4.6 sodium acetate |