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8ADB

Viral tegument-like DUBs

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-16
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.000
Spacegroup nameP 32 2 1
Unit cell lengths101.766, 101.766, 63.204
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution51.360 - 1.730
R-factor0.1684
Rwork0.167
R-free0.19280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)WC-VDT1 1ubb
RMSD bond length0.011
RMSD bond angle1.216
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20_4478)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.0001.840
High resolution limit [Å]1.7301.730
Rmerge0.1512.820
Rmeas0.153
Number of reflections396776346
<I/σ(I)>11.41.1
Completeness [%]100.0100
Redundancy19.619.2
CC(1/2)0.9980.497
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72980.1 M BisTris propane pH 7.0, 2.0 M Ammonium citrate tribasic

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