8AD5
X-ray structure of NqrF(129-408)of Vibrio cholerae variant F406A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-07-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.880, 90.470, 94.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.650 - 1.650 |
R-factor | 0.1826 |
Rwork | 0.181 |
R-free | 0.21420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u9u |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.650 | 48.650 | 1.750 |
High resolution limit [Å] | 1.650 | 10.000 | 1.650 |
Rmerge | 0.153 | 0.037 | 2.540 |
Rmeas | 0.161 | 0.039 | 2.664 |
Total number of observations | 782172 | ||
Number of reflections | 74065 | 396 | 11550 |
<I/σ(I)> | 12.87 | 51.03 | 1.26 |
Completeness [%] | 97.7 | 98.3 | 95.2 |
Redundancy | 10.561 | 9.606 | 10.819 |
CC(1/2) | 0.999 | 0.999 | 0.578 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 292 | 0.1 M citrate, 0.2 M MgAcetate, 20-27 % PEG5000 MME |