Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8AD5

X-ray structure of NqrF(129-408)of Vibrio cholerae variant F406A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2011-07-14
DetectorDECTRIS PILATUS 6M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths72.880, 90.470, 94.500
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.650 - 1.650
R-factor0.1826
Rwork0.181
R-free0.21420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4u9u
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.65048.6501.750
High resolution limit [Å]1.65010.0001.650
Rmerge0.1530.0372.540
Rmeas0.1610.0392.664
Total number of observations782172
Number of reflections7406539611550
<I/σ(I)>12.8751.031.26
Completeness [%]97.798.395.2
Redundancy10.5619.60610.819
CC(1/2)0.9990.9990.578
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52920.1 M citrate, 0.2 M MgAcetate, 20-27 % PEG5000 MME

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon