8A3O
Structure of human Fy-4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-19 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.968 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.421, 45.273, 93.956 |
Unit cell angles | 90.00, 109.93, 90.00 |
Refinement procedure
Resolution | 44.165 - 2.900 |
R-factor | 0.2418 |
Rwork | 0.237 |
R-free | 0.28450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yb5 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.709 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.273 | 45.273 | 3.060 |
High resolution limit [Å] | 2.900 | 9.170 | 2.900 |
Rmerge | 0.052 | 0.209 | |
Rmeas | 0.064 | 0.059 | 0.234 |
Rpim | 0.029 | 0.028 | 0.103 |
Total number of observations | 74872 | 2409 | 11317 |
Number of reflections | 15389 | 540 | 2247 |
<I/σ(I)> | 17.9 | 31.4 | 6.2 |
Completeness [%] | 99.1 | 99.4 | 99.7 |
Redundancy | 4.9 | 4.5 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M MES pH 6.0, 5 % (w/v) PEG 3000 and 30 % (w/v) PEG 200 |