8A2K
human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-[(2-naphthyloxy)methyl]phenyl)-AMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918400 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 93.902, 117.256, 35.884 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.730 - 1.890 |
R-factor | 0.2176 |
Rwork | 0.215 |
R-free | 0.25990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ksy |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.730 | 49.730 | 2.000 |
High resolution limit [Å] | 1.890 | 5.640 | 1.890 |
Rmerge | 0.135 | 0.035 | 1.712 |
Rmeas | 0.145 | 0.038 | 1.836 |
Total number of observations | 258640 | ||
Number of reflections | 32651 | 1384 | 5175 |
<I/σ(I)> | 11.01 | 40.63 | 1.03 |
Completeness [%] | 99.9 | 99.7 | 99.8 |
Redundancy | 7.921 | 6.87 | 7.739 |
CC(1/2) | 0.999 | 0.999 | 0.421 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 100 mM PIPES [pH 7.0], 100 mM magnesium formate dihydrate, 100 mM rubidium chloride, 25% (w/v) PEG smear high, 10 mM EDTA, 100 mM tri-sodium citrate |