8A0Y
Crystal structure of mouse contactin 2 immunoglobulin domains
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-06 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9762 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 131.930, 159.784, 227.886 |
Unit cell angles | 90.00, 96.74, 90.00 |
Refinement procedure
Resolution | 59.820 - 3.500 |
R-factor | 0.227 |
Rwork | 0.225 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2om5 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.000 | 65.000 | 3.590 |
High resolution limit [Å] | 3.500 | 15.240 | 3.500 |
Rmerge | 0.160 | 0.118 | 2.548 |
Rmeas | 0.175 | 0.131 | 2.793 |
Rpim | 0.071 | 0.056 | 1.131 |
Total number of observations | 351683 | 4278 | 27634 |
Number of reflections | 58926 | 739 | 4498 |
<I/σ(I)> | 4.6 | 14.1 | 0.5 |
Completeness [%] | 99.3 | 97.7 | 98.5 |
Redundancy | 6 | 5.8 | 6.1 |
CC(1/2) | 0.974 | 0.966 | 0.238 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 269.15 | 0.1 M Sodium malonate pH 6.0 and 12% w/v Polyethylene glycol 3,350 |