8Z5L
Crystal structure of metallo-beta-lactamse, IMP-1, complexed with a quinolinone-based inhibitor
This is a non-PDB format compatible entry.
Replaces: 8Y0SExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.607, 77.619, 259.813 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.300 - 2.650 |
R-factor | 0.215 |
Rwork | 0.210 |
R-free | 0.28780 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.149 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.520 | 2.780 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.159 | 1.083 |
Rmeas | 0.176 | 1.189 |
Rpim | 0.073 | 0.483 |
Total number of observations | 180450 | 23066 |
Number of reflections | 29377 | 3809 |
<I/σ(I)> | 10.5 | 1.8 |
Completeness [%] | 99.5 | |
Redundancy | 6.1 | 6.1 |
CC(1/2) | 0.992 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 100mM HEPES, 15%(W/V) PEG 20000 |