8YFI
TRIP4 ASCH domain in complex with a 12bp dsDNA (5'-TGAGGTACCTCA-3')
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 66.263, 66.263, 199.250 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.131 - 2.020 |
R-factor | 0.2061 |
Rwork | 0.204 |
R-free | 0.24880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.977 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.050 |
High resolution limit [Å] | 2.020 | 5.480 | 2.020 |
Rmerge | 0.062 | 0.025 | 0.710 |
Rmeas | 0.068 | 0.028 | 0.773 |
Rpim | 0.027 | 0.012 | 0.301 |
Total number of observations | 109981 | ||
Number of reflections | 17897 | 1031 | 866 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 99.7 | 96.5 | 99.8 |
Redundancy | 6.1 | 5.2 | 6.4 |
CC(1/2) | 0.999 | 0.999 | 0.858 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289.15 | 2.0 M (NH4)2SO4 |