Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YA1

HEN EGG WHITE LYSOZYME

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17UM
Synchrotron siteSSRF
BeamlineBL17UM
Temperature [K]100
Detector technologyPIXEL
Collection date2023-12-20
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.924
Spacegroup nameP 43 21 2
Unit cell lengths78.258, 78.258, 36.808
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.130 - 1.570
R-factor0.1947
Rwork0.193
R-free0.21330
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.114
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.1301.590
High resolution limit [Å]1.5701.570
Rmerge0.0560.639
Rmeas0.0570.658
Rpim0.0130.152
Total number of observations31195514320
Number of reflections16608788
<I/σ(I)>30.95.2
Completeness [%]99.9
Redundancy18.818.2
CC(1/2)1.0000.940
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.63000.1 M sodium acetate, 6% sodium chloride

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon