8XTF
Crystal structure of methyltransferase MpaG' in complex with SAH and FDHMP-3C
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-04 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979183 |
Spacegroup name | H 3 2 |
Unit cell lengths | 211.754, 211.754, 67.424 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.910 - 2.130 |
R-factor | 0.1711 |
Rwork | 0.169 |
R-free | 0.21010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.007 |
RMSD bond angle | 0.832 |
Data reduction software | autoPROC |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.360 | 2.190 |
High resolution limit [Å] | 2.130 | 2.130 |
Rmerge | 0.074 | 0.433 |
Rmeas | 0.105 | 0.612 |
Rpim | 0.074 | 0.433 |
Total number of observations | 5160 | |
Number of reflections | 32213 | 2619 |
<I/σ(I)> | 6.2 | 1.5 |
Completeness [%] | 100.0 | |
Redundancy | 2 | 2 |
CC(1/2) | 0.994 | 0.614 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 10%PEG 8000, 0.1 M CHES, pH 9.5 and 0.2 M sodium chloride |