8W9H
Crystal structure of anti-human CLEC12A antibody 50C1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2023-05-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 |
Unit cell lengths | 110.440, 110.440, 76.242 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.810 - 2.000 |
R-factor | 0.1911 |
Rwork | 0.189 |
R-free | 0.23260 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.629 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.450 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rpim | 0.060 | 0.501 |
Number of reflections | 62029 | 4536 |
<I/σ(I)> | 10.8 | |
Completeness [%] | 100.0 | |
Redundancy | 6.9 | |
CC(1/2) | 0.997 | 0.637 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M Bis-tris (pH 5.5), 0.2 M ammonium sulfate, 25% (w/v) PEG3350 |