8W2W
Structure of transthyretin synthetic mutation A120L
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 42.141, 64.069, 84.633 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.030 - 2.070 |
R-factor | 0.2124 |
Rwork | 0.210 |
R-free | 0.23550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.548 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.21rc1_5127) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.030 | 2.140 |
High resolution limit [Å] | 2.070 | 2.070 |
Rmerge | 0.074 | 0.628 |
Rmeas | 0.075 | 0.703 |
Rpim | 0.022 | 0.310 |
Number of reflections | 7206 | 361 |
<I/σ(I)> | 15.1 | 3.2 |
Completeness [%] | 99.7 | 98.6 |
Redundancy | 5.6 | 8.5 |
CC(1/2) | 0.998 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M sodium cacodylate (pH 6.5), 1M sodium chloride, 10% (v/v) glycerol, and 30% (v/v) PEG 600 |