8W0X
Crystal structure of broadly neutralizing antibody hcab40 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 298 |
Detector technology | PIXEL |
Collection date | 2021-12-09 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 79.911, 79.911, 294.567 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.040 - 3.120 |
R-factor | 0.2287 |
Rwork | 0.227 |
R-free | 0.27050 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.293 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.040 | 3.030 |
High resolution limit [Å] | 2.870 | 2.870 |
Rmerge | 0.204 | 5.876 |
Rmeas | 0.209 | 6.025 |
Rpim | 0.047 | 1.321 |
Total number of observations | 511303 | 76157 |
Number of reflections | 25984 | 3711 |
<I/σ(I)> | 8.9 | 0.7 |
Completeness [%] | 99.9 | |
Redundancy | 19.7 | 20.5 |
CC(1/2) | 0.999 | 0.451 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 0.1 M Sodium malonate and 12% PEG 3,350 |