8VMG
Crystal structure of GSK-3 26-383 bound to Axin 383-435
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 195.585, 195.585, 152.204 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.760 - 2.450 |
R-factor | 0.1953 |
Rwork | 0.195 |
R-free | 0.23010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nm0 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.841 |
Data reduction software | XDS |
Data scaling software | pointless (1.12.2) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.760 | 2.510 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.222 | 8.110 |
Rmeas | 0.225 | 8.208 |
Rpim | 0.035 | 1.258 |
Number of reflections | 63244 | 4331 |
<I/σ(I)> | 15.9 | 0.7 |
Completeness [%] | 99.9 | 98.3 |
Redundancy | 41.1 | 42.2 |
CC(1/2) | 0.999 | 0.414 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 100 mM MES, pH 5.5, 1.9 M ammonium sulfate, 200 mM sodium chloride, cryoprotectant: 25% ethylene glycol |