8VFS
oppF ROSE-like RNA thermometer structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-17 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.97741 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 63.602, 63.602, 86.147 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.170 - 2.700 |
R-factor | 0.213 |
Rwork | 0.211 |
R-free | 0.23970 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.063 |
Data reduction software | DIALS (3.8) |
Data scaling software | DIALS (3.8) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.21rc1_5156) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.170 | 2.970 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.096 | 0.712 |
Number of reflections | 5232 | 1267 |
<I/σ(I)> | 18.53 | 2.22 |
Completeness [%] | 97.6 | |
Redundancy | 24 | |
CC(1/2) | 1.000 | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | Ammonium Sulphate, Sodium acetate tri-hydrate pH 4.6, PEG MME 2000 |