8VD0
Human TCR ET650-4 in complex with DQ8-InsC8-15-IAPP2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 72.193, 139.303, 120.495 |
Unit cell angles | 90.00, 93.70, 90.00 |
Refinement procedure
Resolution | 45.510 - 2.400 |
R-factor | 0.1899 |
Rwork | 0.188 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.517 |
Data reduction software | autoXDS |
Data scaling software | XDS (ccp4-8.0) |
Phasing software | PHASER (ccp4-8.0) |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.980 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.070 | 0.522 |
Rmeas | 0.078 | 0.584 |
Rpim | 0.047 | 0.258 |
Number of reflections | 91516 | 4473 |
<I/σ(I)> | 13.3 | 3.2 |
Completeness [%] | 98.7 | |
Redundancy | 5 | |
CC(1/2) | 0.998 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293.15 | 0.2 M K Na tartrate, 15% w/v PEG 20,000 with seeding and additive C8 silver bullet |