8VBM
Structure of bovine anti-HIV Fab ElsE7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.215, 70.612, 123.974 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.230 - 2.540 |
R-factor | 0.2371 |
Rwork | 0.235 |
R-free | 0.28970 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.506 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.230 | 2.630 |
High resolution limit [Å] | 2.540 | 2.540 |
Rmerge | 0.164 | 1.350 |
Rmeas | 0.186 | 1.550 |
Rpim | 0.086 | 0.742 |
Number of reflections | 16971 | 1511 |
<I/σ(I)> | 7.5 | 1.5 |
Completeness [%] | 96.8 | 85.6 |
Redundancy | 4.5 | 4.2 |
CC(1/2) | 0.990 | 0.400 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 277 | 0.1M CHES, pH 9.5, 20% Peg 8000 |