Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8V3M

CCP5 apo structure

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]93
Detector technologyPIXEL
Collection date2022-02-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameP 2 21 21
Unit cell lengths65.224, 80.925, 103.383
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.160 - 1.800
R-factor0.1866
Rwork0.186
R-free0.20090
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.543
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.9301.840
High resolution limit [Å]1.8001.800
Rmerge0.0851.658
Rmeas0.0911.801
Rpim0.034
Number of reflections513282975
<I/σ(I)>15.41.6
Completeness [%]99.899.6
Redundancy13.212.8
CC(1/2)0.9990.669
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72940.15 M DL-Malic acid, pH7.0, 0.1 M imidazole, pH7.0, 16% PEG MME 550

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon