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8V1U

Human DNA Ligase I F872A bound to adenylated nicked DNA with a 5' terminal ribonucleotide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths72.986, 96.832, 114.661
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.870 - 2.000
R-factor0.1884
Rwork0.188
R-free0.21010
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.619
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.030
High resolution limit [Å]2.0002.000
Rmeas0.173
Number of reflections547242745
<I/σ(I)>13.8
Completeness [%]98.399.2
Redundancy5.8
CC(1/2)0.508
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5293MES pH5.5 100mM, Lithium acetate 500mM, PEG 3350 10%

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