8UWM
FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, borolane-based compound Q41 bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.887, 77.993, 110.457 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.800 - 1.970 |
R-factor | 0.1695 |
Rwork | 0.168 |
R-free | 0.20370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.195 |
Data reduction software | XDS (20220820) |
Data scaling software | Aimless (0.7.8) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.800 | 2.020 |
High resolution limit [Å] | 1.970 | 1.970 |
Rmerge | 0.084 | 1.093 |
Rmeas | 0.090 | 1.166 |
Rpim | 0.032 | 0.401 |
Total number of observations | 329625 | 23058 |
Number of reflections | 41115 | 2810 |
<I/σ(I)> | 13.9 | 2 |
Completeness [%] | 99.9 | |
Redundancy | 8 | 8.2 |
CC(1/2) | 0.999 | 0.704 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289.15 | 13uL 19.0 mg/mL FphE (10mM HEPES pH 7.5, 100mM NaCl) were mixed with 5uL Q41 (50mM in DMSO) and incubated at 18C overnight. 0.3 uL FphE-Q41 solution was mixed with 0.15 uL of reservoir solution. Sitting drop reservoir contained 25 uL of 180mM Calcium acetate, 100mM Tris pH 8.5, 22.5% PEG 2000 MME. Crystal was frozen in a solution of ~25% Ethylene glycol, 75% reservoir. |