8UP3
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant Y21F)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-05 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 245.644, 63.185, 92.968 |
| Unit cell angles | 90.00, 103.42, 90.00 |
Refinement procedure
| Resolution | 39.400 - 1.760 |
| R-factor | 0.16498 |
| Rwork | 0.164 |
| R-free | 0.21599 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.741 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 40.000 | 40.000 | 1.780 |
| High resolution limit [Å] | 1.750 | 4.750 | 1.750 |
| Rmerge | 0.080 | 0.036 | 0.994 |
| Rmeas | 0.092 | 0.041 | 1.145 |
| Rpim | 0.043 | 0.019 | 0.560 |
| Total number of observations | 546072 | ||
| Number of reflections | 132560 | 6733 | 6556 |
| <I/σ(I)> | 11.6 | ||
| Completeness [%] | 97.1 | 95.3 | 97 |
| Redundancy | 4.1 | 4.2 | 3.9 |
| CC(1/2) | 0.994 | 0.988 | 0.627 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 uL 18 mg/mL protein in 50 mM HEPES, pH 7, 150 mM sodium chloride + 0.2 uL reservoir (Molecular Dimensions Morpheus A2, pH 6.5) |






