8UJT
Crystal structure of human polymerase eta with incoming dAMPnPP nucleotide opposite urea lesion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-06-21 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 61 |
Unit cell lengths | 98.991, 98.991, 81.818 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.350 - 2.310 |
R-factor | 0.1811 |
Rwork | 0.178 |
R-free | 0.24340 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.982 |
Data reduction software | HKL-2000 (2000 v721.2) |
Data scaling software | HKL-2000 (2000 v721.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1-4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.350 |
High resolution limit [Å] | 2.300 | 2.310 |
Rmerge | 0.240 | 1.300 |
Rpim | 0.090 | 0.500 |
Number of reflections | 19840 | 1028 |
<I/σ(I)> | 29.9 | 3.42 |
Completeness [%] | 98.6 | 100 |
Redundancy | 8.1 | 8.2 |
CC(1/2) | 0.954 | 0.650 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 0.1M MES pH 6.0, 5mM magnesium chloride, 22% PEG MME 2000 |