8UGU
Crystal structure of the second bromodomain of human BRD2 in complex with 4IND
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-04-08 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 65.396, 99.604, 119.236 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.060 - 2.340 |
| R-factor | 0.1671 |
| Rwork | 0.165 |
| R-free | 0.19520 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.732 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.390 |
| High resolution limit [Å] | 2.340 | 6.380 | 2.340 |
| Rmerge | 0.129 | 0.052 | 0.680 |
| Rmeas | 0.139 | 0.057 | 0.750 |
| Rpim | 0.051 | 0.022 | 0.309 |
| Number of reflections | 32399 | 1836 | 1355 |
| <I/σ(I)> | 8.2 | ||
| Completeness [%] | 96.4 | 99.2 | 82.2 |
| Redundancy | 6.5 | 6.5 | 4.9 |
| CC(1/2) | 0.994 | 0.995 | 0.810 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2M sodium fluoride, and 20% (w/v) PEG3350 |






