Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TPB

Synthesis, X-Ray Crystallographic and Biological Activities of Covalent, Non-Peptidic Inhibitors of SARS-CoV-2 Main Protease

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2022-07-30
DetectorADSC QUANTUM 315r
Wavelength(s)0.97919
Spacegroup nameP 1 21 1
Unit cell lengths44.857, 53.597, 114.959
Unit cell angles90.00, 100.21, 90.00
Refinement procedure
Resolution43.842 - 1.880
R-factor0.1999
Rwork0.198
R-free0.24760
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.055
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.720
High resolution limit [Å]1.6304.4201.690
Rmerge0.1090.0294.457
Rmeas0.1230.0325.739
Rpim0.0570.0153.553
Number of reflections529043434830
<I/σ(I)>5.4
Completeness [%]79.499.324.6
Redundancy4.24.81.5
CC(1/2)1.0000.9980.055
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP295.1525% PEG 3350, 0.1M Hepes PH 7.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon