8TFN
Structure of anti-TCRvbeta6-5 antibody in complex with the cognate TCR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | P 2 21 2 |
Unit cell lengths | 64.588, 118.865, 173.021 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 86.510 - 2.540 |
R-factor | 0.2472 |
Rwork | 0.245 |
R-free | 0.29380 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | DIALS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 86.510 | 2.580 |
High resolution limit [Å] | 2.540 | 2.540 |
Rmerge | 0.150 | |
Rmeas | 0.160 | |
Number of reflections | 44885 | 2247 |
<I/σ(I)> | 6.6 | 0.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.6 | 11.5 |
CC(1/2) | 0.997 | 0.351 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | Cystalline precipitate was observed in 20% PEG3350 and 0.2 M Magnesium Sulfate. 10 mM Strontium chloride as an additive resulted in well-formed crystals after 5-7 days. The final crystal was cryoprotected in a solution containing 20% PEG3350, 0.2 M Magnesium Sulfate and 10% glycerol |