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8TE3

Crystal structure of the methyltransferase domain of R882C/R676K DNMT3A homotetramer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2021-10-21
DetectorADSC QUANTUM 315r
Wavelength(s)0.97648
Spacegroup nameP 3
Unit cell lengths177.298, 177.298, 110.736
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.960 - 3.200
R-factor0.2083
Rwork0.207
R-free0.24130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5yx2
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.310
High resolution limit [Å]3.2006.8903.200
Rmerge0.2920.0661.285
Rmeas0.3340.0761.471
Rpim0.1610.0360.712
Total number of observations273938
Number of reflections6434464486431
<I/σ(I)>2.5
Completeness [%]100.0100100
Redundancy4.34.34.2
CC(1/2)0.9970.317
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.2-0.4 M potassium sodium tartrate

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