8TDZ
16mer self-complementary duplex RNA with D:U pair sequence 2
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 2.0.1 |
| Synchrotron site | ALS |
| Beamline | 2.0.1 |
| Temperature [K] | 99 |
| Detector technology | PIXEL |
| Collection date | 2023-04-22 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.038413 |
| Spacegroup name | H 3 2 |
| Unit cell lengths | 41.870, 41.870, 124.300 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 41.430 - 1.640 |
| R-factor | 0.19 |
| Rwork | 0.188 |
| R-free | 0.22160 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.002 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0415) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.670 |
| High resolution limit [Å] | 1.640 | 1.640 |
| Rmerge | 0.053 | 0.184 |
| Rmeas | 0.057 | 0.204 |
| Rpim | 0.019 | 0.084 |
| Number of reflections | 5403 | 250 |
| <I/σ(I)> | 35.5 | 8.4 |
| Completeness [%] | 99.6 | 100 |
| Redundancy | 8.7 | 5 |
| CC(1/2) | 0.993 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 40 mM Lithium chloride, 20 mM Magnesium chloride hexahydrate, 40 mM Sodium cacodylate trihydrate pH 5.5, 30% v/v (+/-)-2-Methyl-2,4-pentanediol, 2 mM Hexammine cobalt(III) chloride |






