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8T6F

Crystal structure of human MBP-Myeloid cell leukemia 1 (Mcl-1) in complex with BRD810 inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2018-10-12
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97903
Spacegroup nameP 21 21 2
Unit cell lengths98.301, 136.957, 38.257
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution79.860 - 1.560
R-factor0.1898
Rwork0.188
R-free0.21810
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.878
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.0001.590
High resolution limit [Å]1.5601.560
Rmerge0.0370.663
Rmeas0.040
Number of reflections745753580
<I/σ(I)>20.51.9
Completeness [%]99.797.3
Redundancy7.1
CC(1/2)1.0000.909
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52933.75 mg/mL MBP-MCL1, 17.5 mM HEPES pH 7.5, 8% PEG 3350, 5% MPD, 5% DMSO, 2.5% PEG400, 75mM NaCl, 25mM Magnesium Formate, 0.75mM DTT, 0.75 mM Maltose, 0.5mM ANJ810, 0.375% glycerol, ~10-4 diluted microseeds, equilibrated against 1.5M NaCl in a EasyXtal 15-Well DropGuard Crystallization Tool

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PDB entries from 2024-11-13

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