8T6F
Crystal structure of human MBP-Myeloid cell leukemia 1 (Mcl-1) in complex with BRD810 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-12 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97903 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 98.301, 136.957, 38.257 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.860 - 1.560 |
R-factor | 0.1898 |
Rwork | 0.188 |
R-free | 0.21810 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.878 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.000 | 1.590 |
High resolution limit [Å] | 1.560 | 1.560 |
Rmerge | 0.037 | 0.663 |
Rmeas | 0.040 | |
Number of reflections | 74575 | 3580 |
<I/σ(I)> | 20.5 | 1.9 |
Completeness [%] | 99.7 | 97.3 |
Redundancy | 7.1 | |
CC(1/2) | 1.000 | 0.909 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 3.75 mg/mL MBP-MCL1, 17.5 mM HEPES pH 7.5, 8% PEG 3350, 5% MPD, 5% DMSO, 2.5% PEG400, 75mM NaCl, 25mM Magnesium Formate, 0.75mM DTT, 0.75 mM Maltose, 0.5mM ANJ810, 0.375% glycerol, ~10-4 diluted microseeds, equilibrated against 1.5M NaCl in a EasyXtal 15-Well DropGuard Crystallization Tool |