8T2O
Crystal structure of SCV PTE G18U RNA in complex with Fab BL3-6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-25 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 77.769, 81.551, 322.768 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.990 - 3.290 |
R-factor | 0.1825 |
Rwork | 0.176 |
R-free | 0.24320 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.232 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 161.380 | 3.550 |
High resolution limit [Å] | 3.290 | 3.290 |
Rmerge | 0.049 | 1.853 |
Rmeas | 0.053 | 1.998 |
Rpim | 0.021 | 0.741 |
Number of reflections | 15976 | 3266 |
<I/σ(I)> | 18.5 | 1 |
Completeness [%] | 99.4 | 99.8 |
Redundancy | 6.8 | 7.1 |
CC(1/2) | 1.000 | 0.537 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 298 | 0.2 M lithium sulfate monohydrate, 0.1 M tris pH 8.6, 20% w/v PEG 3350 |