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8SX6

RNA duplex bound with GMP and AMP monomers

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]99
Detector technologyCCD
Collection date2021-03-14
DetectorMAR CCD 130 mm
Wavelength(s)0.987
Spacegroup nameP 3 2 1
Unit cell lengths43.526, 43.526, 80.139
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution26.730 - 1.450
R-factor0.22118
Rwork0.220
R-free0.24181
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6c8n
RMSD bond length0.028
RMSD bond angle3.611
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.500
High resolution limit [Å]1.4501.450
Rmerge0.1220.531
Rmeas0.1290.558
Rpim0.0420.169
Number of reflections159311584
<I/σ(I)>121.57.9
Completeness [%]98.5100
Redundancy10.710.8
CC(1/2)0.9780.972
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729110% v/v MPD, 0.040 M sodium cacodylate trihydrate, pH 7.0, 0.012 M Spermine tetrahydrochloride, 0.08 M sodium chloride, 0.012 M potassium chloride, 0.02 M magnesium chloride hexahydrate

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