8SVN
Crystal structure of the apo form of pregnane X receptor ligand binding domain
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-10-06 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 83.990, 89.653, 106.873 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 53.440 - 2.200 |
| R-factor | 0.2141 |
| Rwork | 0.210 |
| R-free | 0.23540 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.570 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX (1.20.1_4487) |
| Refinement software | PHENIX ((1.20.1_4487)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 89.650 | 2.270 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.099 | 1.546 |
| Rmeas | 0.103 | 1.603 |
| Rpim | 0.028 | 0.424 |
| Total number of observations | 50090 | |
| Number of reflections | 41701 | 3574 |
| <I/σ(I)> | 13.6 | 1.9 |
| Completeness [%] | 100.0 | |
| Redundancy | 13.5 | 14 |
| CC(1/2) | 0.998 | 0.753 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | in 0.1 M HEPES pH 7.0, and 14% Isopropanol |






