Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SP5

LINE-1 retrotransposon endonuclease domain complex with Mn2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-13
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.92
Spacegroup nameP 21 21 2
Unit cell lengths93.096, 122.378, 43.412
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.550 - 2.230
Rwork0.203
R-free0.25000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.888
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5502.300
High resolution limit [Å]2.2302.230
Number of reflections250072244
<I/σ(I)>9.2
Completeness [%]100.0
Redundancy13.4
CC(1/2)0.9960.853
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.14 M ammonium sulfate, 24% polyethylene glycol 5000 monomethyl ether, 5 mM magnesium chloride

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon