8SLN
Crystal structure of Deinococcus geothermalis PprI complexed with ssDNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2020-05-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 84.990, 84.990, 88.550 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.540 - 2.200 |
R-factor | 0.2385 |
Rwork | 0.237 |
R-free | 0.26780 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.960 |
Data reduction software | HKL-2000 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.260 |
High resolution limit [Å] | 2.200 | 9.840 | 2.200 |
Rmerge | 0.035 | 0.023 | 0.484 |
Rmeas | 0.038 | 0.026 | 0.535 |
Number of reflections | 19166 | 238 | 1396 |
<I/σ(I)> | 22.23 | ||
Completeness [%] | 99.7 | ||
Redundancy | 5.5 | ||
CC(1/2) | 0.999 | 0.999 | 0.944 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 0.3 M potassium sodium tartrate tetrahydrate, 20% polyethylene glycol 3350, and 2.5 mM MnCl2 |