Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SGE

KLHDC2 Kelch Domain with ligand KDRLKZ-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-01
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths44.900, 88.490, 89.220
Unit cell angles90.00, 104.45, 90.00
Refinement procedure
Resolution86.400 - 1.509
R-factor0.18
Rwork0.179
R-free0.20650
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.950
Data reduction softwareautoPROC (1.1.7)
Data scaling softwareautoPROC (1.1.7)
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.7 (18-SEP-2020))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]86.4001.611
High resolution limit [Å]1.5091.509
Rmerge0.0640.869
Number of reflections813964071
<I/σ(I)>9.41.4
Completeness [%]99.751.3
Redundancy3.53.5
CC(1/2)0.9970.513
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29111mM Tris pH 8.0, 8mM Hexamine cobalt, 260-450 mM NaCl, and 24-34% PEG4000

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon