8SGE
KLHDC2 Kelch Domain with ligand KDRLKZ-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-01 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 44.900, 88.490, 89.220 |
Unit cell angles | 90.00, 104.45, 90.00 |
Refinement procedure
Resolution | 86.400 - 1.509 |
R-factor | 0.18 |
Rwork | 0.179 |
R-free | 0.20650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.950 |
Data reduction software | autoPROC (1.1.7) |
Data scaling software | autoPROC (1.1.7) |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.7 (18-SEP-2020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 86.400 | 1.611 |
High resolution limit [Å] | 1.509 | 1.509 |
Rmerge | 0.064 | 0.869 |
Number of reflections | 81396 | 4071 |
<I/σ(I)> | 9.4 | 1.4 |
Completeness [%] | 99.7 | 51.3 |
Redundancy | 3.5 | 3.5 |
CC(1/2) | 0.997 | 0.513 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 11mM Tris pH 8.0, 8mM Hexamine cobalt, 260-450 mM NaCl, and 24-34% PEG4000 |