8SFZ
High Affinity nanobodies against GFP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0750 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 69.649, 101.731, 184.482 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.100 - 1.900 |
R-factor | 0.2071 |
Rwork | 0.207 |
R-free | 0.23110 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.075 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.080 | 0.049 | 0.272 |
Total number of observations | 212023 | ||
Number of reflections | 107233 | 5725 | 3399 |
<I/σ(I)> | 9.4 | ||
Completeness [%] | 89.9 | 95.9 | 57.9 |
Redundancy | 2 | 2 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M potassium formate pH 7.3, 20% (w/v) PEG335 |