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8S7L

Crystal structure of a double mutant of VirB8-like OrfG central and C-terminal domains of Streptococcus thermophilus ICESt3 (Gram positive conjugative type IV secretion system).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2022-11-11
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.967697
Spacegroup nameC 1 2 1
Unit cell lengths152.743, 89.185, 98.424
Unit cell angles90.00, 112.31, 90.00
Refinement procedure
Resolution91.054 - 2.600
Rwork0.202
R-free0.25630
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle2.562
Data reduction softwareXDS
Data scaling softwarepointless (1.12.15)
Phasing softwareMOLREP (11.9.02)
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]91.0542.720
High resolution limit [Å]2.6002.600
Rmerge0.0620.665
Rmeas0.0870.933
Rpim0.0610.653
Number of reflections372154577
<I/σ(I)>10.61.8
Completeness [%]98.899.8
Redundancy3.13.3
CC(1/2)0.9950.682
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Droplet: 0.3 ul [protein (33mg/ml) in 50 mM Tris pH 8.0 + 100 mM NaCl] + 0.3 ul [reservoir] Reservoir: 50 ul [40% v/v PEG 300, 100 mM potassium phosphate citrate, pH 4.2]

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