8RIH
Crystal structure of the Saccharomyces cerevisiae URH1p riboside hydrolase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-22 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.87313 |
Spacegroup name | P 63 |
Unit cell lengths | 140.284, 140.284, 81.343 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 121.490 - 2.740 |
Rwork | 0.186 |
R-free | 0.22450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.908 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 121.490 | 2.890 |
High resolution limit [Å] | 2.600 | 2.600 |
Rpim | 0.167 | 0.988 |
Number of reflections | 13763 | 7714 |
<I/σ(I)> | 5.9 | 1.8 |
Completeness [%] | 94.1 | 81.8 |
Redundancy | 12.9 | 11.2 |
CC(1/2) | 0.981 | 0.570 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291.15 | 100 mM TrisHCl, 800 mM LiCl, 32% PEG 4000 |