8PVM
formaldehyde-inhibited [FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant C299D
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976253 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 87.650, 69.830, 102.890 |
Unit cell angles | 90.00, 102.74, 90.00 |
Refinement procedure
Resolution | 45.060 - 1.380 |
R-factor | 0.1442 |
Rwork | 0.143 |
R-free | 0.17540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.902 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.060 | 45.060 | 1.420 |
High resolution limit [Å] | 1.380 | 6.170 | 1.380 |
Rmerge | 0.112 | 0.052 | 1.838 |
Rmeas | 0.122 | 0.057 | 2.000 |
Number of reflections | 247118 | 2863 | 18136 |
<I/σ(I)> | 9.16 | ||
Completeness [%] | 99.4 | ||
Redundancy | 6.39 | ||
CC(1/2) | 0.998 | 0.996 | 0.381 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 0.1M Mes (pH6.0), 0.4 M MgCl2, 20 % PEG4000, 20% glycerol |