Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PVM

formaldehyde-inhibited [FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant C299D

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-02
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.976253
Spacegroup nameP 1 21 1
Unit cell lengths87.650, 69.830, 102.890
Unit cell angles90.00, 102.74, 90.00
Refinement procedure
Resolution45.060 - 1.380
R-factor0.1442
Rwork0.143
R-free0.17540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.902
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.19.1_4122: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.06045.0601.420
High resolution limit [Å]1.3806.1701.380
Rmerge0.1120.0521.838
Rmeas0.1220.0572.000
Number of reflections247118286318136
<I/σ(I)>9.16
Completeness [%]99.4
Redundancy6.39
CC(1/2)0.9980.9960.381
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62770.1M Mes (pH6.0), 0.4 M MgCl2, 20 % PEG4000, 20% glycerol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon